Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421757_10795 | Not Available | Positive | 3656339 - 3657076 | 26236.3 |
| transcriptional regulator, marr family | SAMN05421757_10796 | Not Available | Negative | 3657070 - 3657567 | 19276.2 |
| antitoxin cptb | SAMN05421757_10797 | Not Available | Negative | 3657655 - 3657930 | 10692.5 |
| helix-turn-helix | SAMN05421757_10798 | Not Available | Negative | 3657927 - 3658328 | 14657.4 |
| aspartate aminotransferase | SAMN05421757_10799 | Not Available | Positive | 3658427 - 3659629 | 42859.0 |
| hypothetical protein | SAMN05421757_107100 | Not Available | Positive | 3659783 - 3660193 | 15936.0 |
| hypothetical protein | SAMN05421757_107101 | Not Available | Positive | 3660239 - 3661183 | 35101.1 |
| multidrug resistance protein, mate family | SAMN05421757_107102 | Not Available | Negative | 3661194 - 3662573 | 48771.1 |
| methyltransferase domain-containing protein | SAMN05421757_107103 | Not Available | Negative | 3662641 - 3663240 | 21895.7 |
| dna topoisomerase iv subunit b | SAMN05421757_107104 | Not Available | Positive | 3663377 - 3665338 | 71813.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
