Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, luxr family | SAMN05421757_10785 | Not Available | Positive | 3647819 - 3648418 | 22656.2 |
| hypothetical protein | SAMN05421757_10786 | Not Available | Negative | 3648598 - 3648954 | 12371.9 |
| hypothetical protein | SAMN05421757_10787 | Not Available | Negative | 3649659 - 3650069 | 14849.8 |
| hypothetical protein | SAMN05421757_10788 | Not Available | Negative | 3650066 - 3650353 | 10328.2 |
| acyl homoserine lactone synthase | SAMN05421757_10789 | Not Available | Positive | 3650726 - 3651358 | 23405.9 |
| hypothetical protein | SAMN05421757_10790 | Not Available | Negative | 3651437 - 3651529 | 3059.68 |
| thymidylate synthase (fad) | SAMN05421757_10791 | Not Available | Negative | 3652193 - 3653098 | 34369.8 |
| hypothetical protein | SAMN05421757_10792 | Not Available | Positive | 3653317 - 3654393 | 37581.6 |
| protein of unknown function | SAMN05421757_10793 | Not Available | Positive | 3654401 - 3655810 | 51681.5 |
| lactoylglutathione lyase | SAMN05421757_10794 | Not Available | Positive | 3655897 - 3656325 | 16279.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
