Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-aminopeptidase | SAMN05421757_10765 | Not Available | Negative | 3628003 - 3629004 | 33562.9 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421757_10766 | Not Available | Negative | 3629022 - 3629762 | 25436.6 |
| predicted oxidoreductase | SAMN05421757_10767 | Not Available | Positive | 3629808 - 3630794 | 35179.9 |
| aldehyde dehydrogenase (nad+) | SAMN05421757_10768 | Not Available | Negative | 3630804 - 3632258 | 50189.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421757_10769 | Not Available | Negative | 3632332 - 3633045 | 25883.0 |
| esterase/lipase | SAMN05421757_10770 | Not Available | Negative | 3633177 - 3634154 | 33721.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421757_10771 | Not Available | Negative | 3634151 - 3634915 | 27335.5 |
| histidinol-phosphate aminotransferase | SAMN05421757_10772 | Not Available | Positive | 3634958 - 3636121 | 40707.9 |
| hypothetical protein | SAMN05421757_10773 | Not Available | Positive | 3636200 - 3636385 | 6742.51 |
| alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase | SAMN05421757_10774 | Not Available | Negative | 3636390 - 3637586 | 42346.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
