Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted zn-dependent protease, minimal metalloprotease (mmp)-like domain | SAMN05421757_10745 | Not Available | Positive | 3606942 - 3607346 | 15545.2 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05421757_10746 | Not Available | Positive | 3607495 - 3608415 | 32757.9 |
| 6-phosphofructokinase | SAMN05421757_10747 | Not Available | Positive | 3608633 - 3609625 | 34259.7 |
| arsenate reductase | SAMN05421757_10748 | Not Available | Positive | 3609639 - 3610067 | 15736.0 |
| hypothetical protein | SAMN05421757_10749 | Not Available | Negative | 3610157 - 3610432 | 9894.74 |
| hd domain-containing protein | SAMN05421757_10750 | Not Available | Negative | 3610646 - 3611545 | 33157.5 |
| magnesium transporter | SAMN05421757_10751 | Not Available | Negative | 3611592 - 3612998 | 50222.3 |
| hypothetical protein | SAMN05421757_10752 | Not Available | Positive | 3613220 - 3613549 | 11346.4 |
| nad+ synthase | SAMN05421757_10753 | Not Available | Negative | 3613586 - 3615259 | 61408.5 |
| uncharacterized conserved protein | SAMN05421757_10754 | Not Available | Positive | 3615429 - 3616913 | 53206.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
