Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421757_10724 | Not Available | Negative | 3587170 - 3587865 | 25319.0 |
| urea transport system atp-binding protein | SAMN05421757_10725 | Not Available | Negative | 3587868 - 3588608 | 27182.8 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421757_10726 | Not Available | Negative | 3588605 - 3589837 | 43717.7 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421757_10727 | Not Available | Negative | 3589929 - 3591911 | 70674.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421757_10728 | Not Available | Negative | 3591985 - 3593259 | 46063.2 |
| putative holin-x, holin superfamily iii | SAMN05421757_10729 | Not Available | Negative | 3593648 - 3594109 | 15906.9 |
| hypothetical protein | SAMN05421757_10730 | Not Available | Negative | 3594123 - 3594452 | 11939.8 |
| predicted purr-regulated permease perm | SAMN05421757_10731 | Not Available | Negative | 3594456 - 3595613 | 41275.5 |
| hypothetical protein | SAMN05421757_10732 | Not Available | Negative | 3595619 - 3595858 | 9347.0 |
| putative hydroxymethylpyrimidine transport system permease protein | SAMN05421757_10733 | Not Available | Negative | 3595960 - 3596697 | 25590.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
