Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| purine-binding chemotaxis protein chew | SAMN05421757_106275 | Not Available | Positive | 3555784 - 3556254 | 17008.6 |
| chemotaxis protein methyltransferase cher | SAMN05421757_106276 | Not Available | Positive | 3556251 - 3557150 | 33805.8 |
| two-component system, chemotaxis family, response regulator chey | SAMN05421757_106277 | Not Available | Positive | 3557153 - 3557539 | 13891.1 |
| hypothetical protein | SAMN05421757_106278 | Not Available | Positive | 3557614 - 3557937 | 11338.5 |
| cysteine synthase a | SAMN05421757_106279 | Not Available | Negative | 3558255 - 3559346 | 38499.9 |
| ca2+-binding protein, rtx toxin-related | SAMN05421757_106280 | Not Available | Negative | 3559461 - 3562964 | 118896.0 |
| hypothetical protein | SAMN05421757_106281 | Not Available | Negative | 3563269 - 3564339 | 38080.1 |
| Trna-ser | Not Available | Not Available | Positive | 3564439 - 3564528 | Not Available |
| sporulation related domain-containing protein | SAMN05421757_1072 | Not Available | Positive | 3564744 - 3565850 | 38053.6 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | SAMN05421757_1073 | Not Available | Positive | 3565869 - 3567026 | 41381.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
