Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | SAMN05421757_106265 | Not Available | Negative | 3543658 - 3545328 | 63215.8 |
| maltose abc transporter membrane protein /trehalose abc transporter membrane protein /sucrose abc transporter membrane protein | SAMN05421757_106266 | Not Available | Negative | 3545349 - 3546497 | 41819.9 |
| maltose abc transporter membrane protein /trehalose abc transporter membrane protein /sucrose abc transporter membrane protein | SAMN05421757_106267 | Not Available | Negative | 3546510 - 3547697 | 43975.1 |
| maltose-binding protein /trehalose-binding protein /sucrose-binding protein | SAMN05421757_106268 | Not Available | Negative | 3547789 - 3549144 | 48488.4 |
| transcriptional regulator, laci family | SAMN05421757_106269 | Not Available | Positive | 3549407 - 3550438 | 37173.5 |
| beta-glucosidase | SAMN05421757_106270 | Not Available | Positive | 3550449 - 3551768 | 49159.9 |
| glucokinase | SAMN05421757_106271 | Not Available | Positive | 3551778 - 3552746 | 33361.1 |
| chemotaxis protein chex | SAMN05421757_106272 | Not Available | Positive | 3552913 - 3553194 | 9891.82 |
| two-component system, chemotaxis family, response regulator chey | SAMN05421757_106273 | Not Available | Positive | 3553198 - 3553578 | 13465.6 |
| two-component system, chemotaxis family, sensor kinase chea | SAMN05421757_106274 | Not Available | Positive | 3553575 - 3555776 | 78116.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
