Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_106255 | Not Available | Negative | 3533711 - 3534172 | 16132.2 |
| hypothetical protein | SAMN05421757_106256 | Not Available | Negative | 3534183 - 3534290 | 4088.32 |
| xanthine dehydrogenase accessory factor | SAMN05421757_106257 | Not Available | Negative | 3534292 - 3535164 | 29895.9 |
| uncharacterized conserved protein, contains von willebrand factor type a (vwa) domain | SAMN05421757_106258 | Not Available | Negative | 3535161 - 3536354 | 43311.8 |
| moxr-like atpase | SAMN05421757_106259 | Not Available | Negative | 3536351 - 3537229 | 32061.4 |
| carbon monoxide dehydrogenase, large subunit apoprotein | SAMN05421757_106260 | Not Available | Negative | 3537271 - 3539691 | 87843.1 |
| carbon monoxide dehydrogenase, small subunit | SAMN05421757_106261 | Not Available | Negative | 3539688 - 3540179 | 17561.1 |
| carbon monoxide dehydrogenase, medium subunit | SAMN05421757_106262 | Not Available | Negative | 3540191 - 3541045 | 29800.6 |
| mhyt domain-containing protein, no-binding membrane sensor | SAMN05421757_106263 | Not Available | Negative | 3541252 - 3542397 | 40838.3 |
| maltose abc transporter atp-binding protein /trehalose abc transporter atp-binding protein /sucrose abc transporter atp-binding protein | SAMN05421757_106264 | Not Available | Negative | 3542540 - 3543640 | 39946.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
