Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_106205 | Not Available | Negative | 3472413 - 3474710 | 77621.1 |
| protein of unknown function | SAMN05421757_106206 | Not Available | Negative | 3474988 - 3475635 | 22718.2 |
| cu(i)-responsive transcriptional regulator | SAMN05421757_106207 | Not Available | Negative | 3475632 - 3476045 | 15197.3 |
| cu+-exporting atpase | SAMN05421757_106208 | Not Available | Negative | 3476055 - 3478556 | 85855.5 |
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN05421757_106209 | Not Available | Positive | 3478937 - 3479596 | 23879.4 |
| hypothetical protein | SAMN05421757_106210 | Not Available | Negative | 3479774 - 3480049 | 9899.91 |
| non-ribosomal peptide synthetase component f | SAMN05421757_106211 | Not Available | Negative | 3480218 - 3484249 | 143537.0 |
| hydrogenase maturation protein, carbamoyl dehydratase hype | SAMN05421757_106212 | Not Available | Negative | 3484412 - 3485428 | 35376.6 |
| hydrogenase maturation protein, carbamoyltransferase hypf | SAMN05421757_106213 | Not Available | Negative | 3485425 - 3487737 | 82782.5 |
| hydrogenase maturation protein hypd | SAMN05421757_106214 | Not Available | Negative | 3487734 - 3488843 | 39250.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
