Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421757_106185 | Not Available | Positive | 3450981 - 3451634 | 23135.7 |
| predicted arabinose efflux permease, mfs family | SAMN05421757_106186 | Not Available | Negative | 3451678 - 3452901 | 42586.1 |
| molybdate transport system atp-binding protein | SAMN05421757_106187 | Not Available | Negative | 3452894 - 3454009 | 39700.3 |
| molybdate transport system permease protein | SAMN05421757_106188 | Not Available | Negative | 3454006 - 3454677 | 23938.9 |
| molybdate transport system substrate-binding protein | SAMN05421757_106189 | Not Available | Negative | 3454683 - 3455468 | 28102.6 |
| molybdate transport system regulatory protein | SAMN05421757_106190 | Not Available | Negative | 3455531 - 3455902 | 13207.0 |
| uncharacterized membrane protein | SAMN05421757_106191 | Not Available | Negative | 3455955 - 3457655 | 62203.1 |
| deoxyribodipyrimidine photolyase-related protein | SAMN05421757_106192 | Not Available | Positive | 3457699 - 3459369 | 63743.3 |
| acetoin utilization deacetylase acuc | SAMN05421757_106193 | Not Available | Positive | 3459612 - 3460643 | 36709.2 |
| n-carbamoylputrescine amidase | SAMN05421757_106194 | Not Available | Positive | 3460636 - 3461499 | 31566.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
