Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN05421757_106135 | Not Available | Negative | 3400174 - 3401940 | 64915.7 |
| phosphoribosylformylglycinamidine synthase subunit i | SAMN05421757_106136 | Not Available | Negative | 3402036 - 3402704 | 23367.9 |
| hypothetical protein | SAMN05421757_106137 | Not Available | Negative | 3402849 - 3403499 | 21516.2 |
| phosphoribosylformylglycinamidine synthase | SAMN05421757_106138 | Not Available | Negative | 3403739 - 3403978 | 8319.12 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN05421757_106139 | Not Available | Negative | 3404108 - 3404869 | 28335.4 |
| hypothetical protein | SAMN05421757_106140 | Not Available | Positive | 3405090 - 3406220 | 39463.9 |
| hypothetical protein | SAMN05421757_106141 | Not Available | Positive | 3406304 - 3406633 | 12431.9 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN05421757_106142 | Not Available | Positive | 3406796 - 3407803 | 35222.1 |
| dna repair photolyase | SAMN05421757_106143 | Not Available | Negative | 3407823 - 3408914 | 40033.9 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN05421757_106144 | Not Available | Positive | 3409092 - 3409799 | 25392.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
