Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| utp-hexose-1-phosphate uridylyltransferase /udp-glucose-hexose-1-phosphate uridylyltransferase | SAMN05421757_10695 | Not Available | Positive | 3353110 - 3354180 | 40251.2 |
| galactokinase | SAMN05421757_10696 | Not Available | Positive | 3354177 - 3355289 | 38667.0 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421757_10697 | Not Available | Positive | 3355466 - 3356602 | 39766.0 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421757_10698 | Not Available | Positive | 3356708 - 3357631 | 31712.2 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421757_10699 | Not Available | Positive | 3357628 - 3358608 | 35014.7 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05421757_106100 | Not Available | Positive | 3358601 - 3359353 | 26742.3 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421757_106101 | Not Available | Positive | 3359350 - 3360045 | 24907.4 |
| lactate dehydrogenase | SAMN05421757_106102 | Not Available | Negative | 3360051 - 3360995 | 33274.8 |
| chemotaxis protein ched | SAMN05421757_106103 | Not Available | Negative | 3361353 - 3361874 | 18612.7 |
| two-component system, chemotaxis family, response regulator cheb | SAMN05421757_106104 | Not Available | Negative | 3361874 - 3362902 | 36619.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
