Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | SAMN05421757_10645 | Not Available | Negative | 3295327 - 3296061 | 26483.0 |
| tigr00255 family protein | SAMN05421757_10646 | Not Available | Positive | 3296528 - 3297421 | 31857.0 |
| guanylate kinase | SAMN05421757_10647 | Not Available | Positive | 3297428 - 3298072 | 24126.4 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN05421757_10648 | Not Available | Positive | 3298069 - 3298587 | 17920.8 |
| cystathionine gamma-synthase | SAMN05421757_10649 | Not Available | Positive | 3298664 - 3299881 | 42871.0 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05421757_10650 | Not Available | Positive | 3299944 - 3300990 | 38508.1 |
| phosphate abc transporter substrate-binding protein, phot family | SAMN05421757_10651 | Not Available | Positive | 3301271 - 3302308 | 36151.5 |
| phosphate abc transporter membrane protein 1, phot family | SAMN05421757_10652 | Not Available | Positive | 3302481 - 3303962 | 52780.5 |
| phosphate abc transporter membrane protein 2, phot family | SAMN05421757_10653 | Not Available | Positive | 3303959 - 3305323 | 49358.4 |
| phosphate abc transporter atp-binding protein, phot family | SAMN05421757_10654 | Not Available | Positive | 3305338 - 3306135 | 29612.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
