Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphotransferase chpt | SAMN05421757_10625 | Not Available | Negative | 3277688 - 3278299 | 21946.4 |
| protein of unknown function | SAMN05421757_10626 | Not Available | Positive | 3278328 - 3278507 | 6510.8 |
| ornithine-acyl[acyl carrier protein] n-acyltransferase | SAMN05421757_10627 | Not Available | Positive | 3278690 - 3279466 | 28581.1 |
| lyso-ornithine lipid acyltransferase | SAMN05421757_10628 | Not Available | Positive | 3279463 - 3280308 | 30938.7 |
| thiamine-phosphate pyrophosphorylase | SAMN05421757_10629 | Not Available | Negative | 3280377 - 3280994 | 21832.8 |
| trna/rrna methyltransferase | SAMN05421757_10630 | Not Available | Positive | 3281125 - 3281865 | 27009.4 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN05421757_10631 | Not Available | Positive | 3281885 - 3283039 | 42750.8 |
| carboxypeptidase taq | SAMN05421757_10632 | Not Available | Positive | 3283043 - 3284515 | 54071.5 |
| hypothetical protein | SAMN05421757_10633 | Not Available | Negative | 3284520 - 3284900 | 12833.3 |
| hypothetical protein | SAMN05421757_10634 | Not Available | Negative | 3284941 - 3285954 | 34609.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
