Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 3269862 - 3269951 | Not Available |
| hypothetical protein | SAMN05421757_10616 | Not Available | Positive | 3270126 - 3270986 | 31438.1 |
| lsu ribosomal protein l21p | SAMN05421757_10617 | Not Available | Positive | 3271189 - 3271857 | 22876.6 |
| lsu ribosomal protein l27p | SAMN05421757_10618 | Not Available | Positive | 3271877 - 3272146 | 9511.48 |
| hypothetical protein | SAMN05421757_10619 | Not Available | Positive | 3272229 - 3272555 | 11695.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421757_10620 | Not Available | Positive | 3272614 - 3273159 | 19607.5 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421757_10621 | Not Available | Positive | 3273160 - 3274215 | 39363.9 |
| gtp-binding protein | SAMN05421757_10622 | Not Available | Positive | 3274212 - 3275267 | 37269.7 |
| glutamate 5-kinase | SAMN05421757_10623 | Not Available | Positive | 3275255 - 3276382 | 39229.0 |
| glutamate-5-semialdehyde dehydrogenase | SAMN05421757_10624 | Not Available | Positive | 3276409 - 3277662 | 44374.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
