Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_101269 | Not Available | Negative | 303549 - 304058 | 19396.9 |
| fmn adenylyltransferase /riboflavin kinase | SAMN05421757_101270 | Not Available | Negative | 304055 - 305035 | 34954.7 |
| 3-hydroxybutyryl-coa dehydratase | SAMN05421757_101271 | Not Available | Negative | 305083 - 305529 | 16380.8 |
| had-superfamily class iia hydrolase, tigr01459 | SAMN05421757_101272 | Not Available | Negative | 305752 - 306621 | 31474.7 |
| coniferyl-aldehyde dehydrogenase | SAMN05421757_101273 | Not Available | Negative | 306706 - 308133 | 50653.1 |
| manganese-dependent inorganic pyrophosphatase | SAMN05421757_101274 | Not Available | Negative | 308281 - 309201 | 32969.7 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05421757_101275 | Not Available | Positive | 309395 - 310657 | 44490.9 |
| hypothetical protein | SAMN05421757_101276 | Not Available | Negative | 310731 - 310985 | 9572.67 |
| chaperonin groes | SAMN05421757_101277 | Not Available | Positive | 311576 - 311863 | 10193.3 |
| chaperonin groel | SAMN05421757_101278 | Not Available | Positive | 311915 - 313564 | 58006.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
