Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05421757_105315 | Not Available | Positive | 3201315 - 3202643 | 46033.2 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05421757_105316 | Not Available | Positive | 3202809 - 3203993 | 43231.7 |
| dna translocase ftsk | SAMN05421757_105317 | Not Available | Positive | 3204009 - 3206978 | 106135.0 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05421757_105318 | Not Available | Positive | 3207069 - 3208613 | 54326.5 |
| outer membrane lipoprotein-sorting protein | SAMN05421757_105319 | Not Available | Positive | 3208704 - 3209300 | 21434.5 |
| hypothetical protein | SAMN05421757_105320 | Not Available | Negative | 3209322 - 3209906 | 22053.4 |
| hypothetical protein | SAMN05421757_105321 | Not Available | Negative | 3210024 - 3210905 | 30479.7 |
| heat shock protein hspq | SAMN05421757_105322 | Not Available | Positive | 3210988 - 3211314 | 12680.7 |
| serine/threonine-protein kinase rsbw | SAMN05421757_105323 | Not Available | Negative | 3211856 - 3212173 | 11641.0 |
| anti-sigma b factor antagonist | SAMN05421757_105324 | Not Available | Negative | 3212410 - 3212754 | 12507.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
