Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_105275 | Not Available | Positive | 3162522 - 3163085 | 20964.3 |
| rnase hii | SAMN05421757_105276 | Not Available | Positive | 3163230 - 3163862 | 22142.8 |
| modification methylase | SAMN05421757_105277 | Not Available | Positive | 3163954 - 3165066 | 41357.6 |
| transcriptional regulator, arac family | SAMN05421757_105278 | Not Available | Negative | 3165176 - 3166081 | 33010.2 |
| predicted oxidoreductase | SAMN05421757_105279 | Not Available | Positive | 3166251 - 3167291 | 37811.4 |
| alkane 1-monooxygenase | SAMN05421757_105280 | Not Available | Negative | 3167288 - 3168421 | 43828.1 |
| a/g-specific dna-adenine glycosylase | SAMN05421757_105281 | Not Available | Negative | 3168485 - 3169552 | 38698.4 |
| hypothetical protein | SAMN05421757_105282 | Not Available | Positive | 3169635 - 3170180 | 19701.6 |
| protein-disulfide isomerase | SAMN05421757_105283 | Not Available | Positive | 3170177 - 3170830 | 24083.3 |
| lipid-a-disaccharide kinase | SAMN05421757_105284 | Not Available | Negative | 3170839 - 3171828 | 34408.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
