Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular polysaccharide transport system permease protein | SAMN05421757_105265 | Not Available | Negative | 3152196 - 3153023 | 30891.7 |
| capsular polysaccharide transport system permease protein | SAMN05421757_105266 | Not Available | Positive | 3153090 - 3154877 | 64676.9 |
| capsular polysaccharide transport system atp-binding protein | SAMN05421757_105267 | Not Available | Positive | 3154888 - 3155568 | 24638.2 |
| udp-glucose 4-epimerase | SAMN05421757_105268 | Not Available | Positive | 3155549 - 3156535 | 34564.1 |
| glycerol kinase | SAMN05421757_105269 | Not Available | Negative | 3156558 - 3158048 | 53988.0 |
| homodimeric glycerol 3-phosphate dehydrogenase (quinone) | SAMN05421757_105270 | Not Available | Negative | 3158161 - 3159756 | 58670.6 |
| transcriptional regulator, deor family | SAMN05421757_105271 | Not Available | Positive | 3159938 - 3160711 | 27639.1 |
| 2-hydroxychromene-2-carboxylate isomerase | SAMN05421757_105272 | Not Available | Negative | 3160701 - 3161291 | 22254.4 |
| hypothetical protein | SAMN05421757_105273 | Not Available | Negative | 3161373 - 3162077 | 25766.8 |
| hypothetical protein | SAMN05421757_105274 | Not Available | Negative | 3162049 - 3162342 | 10537.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
