Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_105225 | Not Available | Positive | 3104610 - 3104969 | 13303.7 |
| 2-keto-3-deoxygluconate kinase | SAMN05421757_105226 | Not Available | Negative | 3104986 - 3105906 | 31749.6 |
| atp-binding cassette, subfamily b | SAMN05421757_105227 | Not Available | Positive | 3106131 - 3107924 | 63912.3 |
| fatty-acyl-coa synthase | SAMN05421757_105228 | Not Available | Positive | 3108075 - 3109973 | 69275.8 |
| flagellar p-ring protein precursor flgi | SAMN05421757_105229 | Not Available | Negative | 3110271 - 3111368 | 38211.1 |
| flagellar hook-associated protein 3 flgl | SAMN05421757_105230 | Not Available | Negative | 3111368 - 3112372 | 34356.2 |
| flagellar hook-associated protein 1 flgk | SAMN05421757_105231 | Not Available | Negative | 3112376 - 3113833 | 50245.5 |
| flagellar hook protein flge | SAMN05421757_105232 | Not Available | Negative | 3113861 - 3115171 | 44867.7 |
| chemotaxis protein motb | SAMN05421757_105233 | Not Available | Negative | 3115270 - 3116094 | 29310.1 |
| polysaccharide export outer membrane protein | SAMN05421757_105234 | Not Available | Positive | 3116414 - 3117019 | 21619.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
