Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar m-ring protein flif | SAMN05421757_105215 | Not Available | Negative | 3093467 - 3095071 | 56697.7 |
| flagellar flil protein | SAMN05421757_105216 | Not Available | Positive | 3095191 - 3095670 | 17061.8 |
| hypothetical protein | SAMN05421757_105217 | Not Available | Positive | 3095680 - 3096048 | 13200.1 |
| mgte intracellular n domain-containing protein | SAMN05421757_105218 | Not Available | Positive | 3096045 - 3096641 | 21455.6 |
| chemotaxis protein mota | SAMN05421757_105219 | Not Available | Positive | 3096717 - 3097589 | 31461.4 |
| hypothetical protein | SAMN05421757_105220 | Not Available | Positive | 3097586 - 3099805 | 79034.8 |
| transglycosylase slt domain-containing protein | SAMN05421757_105221 | Not Available | Positive | 3099907 - 3100650 | 26357.3 |
| flagellar biosynthesis protein flha | SAMN05421757_105222 | Not Available | Positive | 3100669 - 3102753 | 73884.2 |
| flagellar biosynthetic protein flir | SAMN05421757_105223 | Not Available | Positive | 3102753 - 3103523 | 26014.8 |
| flagellar biosynthetic protein flhb | SAMN05421757_105224 | Not Available | Positive | 3103520 - 3104608 | 39032.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
