Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-basal body complex protein flie | SAMN05421757_105205 | Not Available | Positive | 3087980 - 3088270 | 9977.95 |
| flagellar biosynthetic protein fliq | SAMN05421757_105206 | Not Available | Positive | 3088275 - 3088541 | 9735.41 |
| flagellar basal-body rod protein flgf | SAMN05421757_105207 | Not Available | Positive | 3088545 - 3089252 | 24500.8 |
| flagellar basal-body rod protein flgg | SAMN05421757_105208 | Not Available | Positive | 3089266 - 3090051 | 27180.9 |
| flagella basal body p-ring formation protein flga | SAMN05421757_105209 | Not Available | Positive | 3090048 - 3090500 | 15342.7 |
| flagellar l-ring protein precursor flgh | SAMN05421757_105210 | Not Available | Positive | 3090497 - 3091246 | 27481.7 |
| hypothetical protein | SAMN05421757_105211 | Not Available | Positive | 3091258 - 3091770 | 17993.4 |
| flagellar biosynthetic protein flip | SAMN05421757_105212 | Not Available | Negative | 3091833 - 3092585 | 26909.9 |
| flagellar motor switch protein flin/fliy | SAMN05421757_105213 | Not Available | Negative | 3092582 - 3092869 | 10589.7 |
| flagellar assembly protein flih | SAMN05421757_105214 | Not Available | Negative | 3092862 - 3093467 | 21936.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
