Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hook-length control protein flik | SAMN05421757_105195 | Not Available | Negative | 3079431 - 3081857 | 83315.0 |
| rod binding protein | SAMN05421757_105196 | Not Available | Positive | 3081968 - 3082267 | 10635.5 |
| hypothetical protein | SAMN05421757_105197 | Not Available | Positive | 3082257 - 3082601 | 12828.3 |
| flagellin | SAMN05421757_105198 | Not Available | Positive | 3082815 - 3084068 | 42309.0 |
| flagellar protein flaf | SAMN05421757_105199 | Not Available | Positive | 3084157 - 3084534 | 13472.0 |
| flagellar protein flbt | SAMN05421757_105200 | Not Available | Positive | 3084531 - 3084935 | 15034.3 |
| protein of unknown function | SAMN05421757_105201 | Not Available | Positive | 3084932 - 3085732 | 28718.6 |
| flagellum-specific atp synthase | SAMN05421757_105202 | Not Available | Negative | 3085769 - 3087094 | 46220.2 |
| flagellar basal-body rod protein flgb | SAMN05421757_105203 | Not Available | Positive | 3087174 - 3087560 | 14173.6 |
| flagellar basal-body rod protein flgc | SAMN05421757_105204 | Not Available | Positive | 3087575 - 3087967 | 14241.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
