Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMN05421757_101249 | Not Available | Positive | 280535 - 281563 | 36418.4 |
| hypothetical protein | SAMN05421757_101250 | Not Available | Negative | 281610 - 282617 | 36668.9 |
| cation transport protein chac | SAMN05421757_101251 | Not Available | Positive | 282689 - 283255 | 20763.7 |
| hypothetical protein | SAMN05421757_101252 | Not Available | Positive | 283334 - 284593 | 45768.1 |
| chemotaxis protein motb | SAMN05421757_101253 | Not Available | Positive | 284597 - 286822 | 79744.0 |
| peptidase family m23 | SAMN05421757_101254 | Not Available | Negative | 286819 - 287826 | 35208.6 |
| atp-dependent clp protease atp-binding subunit clpa | SAMN05421757_101255 | Not Available | Negative | 287832 - 290168 | 85183.9 |
| hydroxyacylglutathione hydrolase | SAMN05421757_101256 | Not Available | Negative | 290451 - 291212 | 26606.6 |
| methyltransferase domain-containing protein | SAMN05421757_101257 | Not Available | Positive | 291281 - 292036 | 27942.8 |
| atp synthase f1 subcomplex delta subunit | SAMN05421757_101258 | Not Available | Positive | 292467 - 293027 | 19432.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
