Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | SAMN05421757_10555 | Not Available | Negative | 2921454 - 2923778 | 83774.4 |
| ketopantoate reductase | SAMN05421757_10556 | Not Available | Negative | 2923880 - 2924857 | 35024.4 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05421757_10557 | Not Available | Negative | 2924867 - 2926408 | 53788.0 |
| fumarylpyruvate hydrolase | SAMN05421757_10558 | Not Available | Negative | 2926440 - 2927126 | 24806.8 |
| transcriptional regulator, gntr family | SAMN05421757_10559 | Not Available | Positive | 2927259 - 2927987 | 26225.5 |
| nitt/taut family transport system substrate-binding protein | SAMN05421757_10560 | Not Available | Positive | 2928050 - 2929030 | 35662.0 |
| nitt/taut family transport system permease protein | SAMN05421757_10561 | Not Available | Positive | 2929110 - 2929871 | 27150.1 |
| nitt/taut family transport system atp-binding protein | SAMN05421757_10562 | Not Available | Positive | 2929858 - 2930658 | 29524.6 |
| nitt/taut family transport system permease protein | SAMN05421757_10563 | Not Available | Positive | 2930662 - 2931414 | 27621.0 |
| tripartite atp-independent transporter solute receptor, dctp family | SAMN05421757_10564 | Not Available | Positive | 2931805 - 2932797 | 36184.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
