Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein | SAMN05421757_101239 | Not Available | Negative | 270012 - 270821 | 29927.2 |
| hypothetical protein | SAMN05421757_101240 | Not Available | Negative | 271016 - 271165 | 5369.9 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421757_101241 | Not Available | Positive | 271204 - 272178 | 34234.8 |
| hint domain-containing protein | SAMN05421757_101242 | Not Available | Positive | 272425 - 273507 | 38305.3 |
| ssu ribosomal protein s4p | SAMN05421757_101243 | Not Available | Positive | 273681 - 274301 | 23453.3 |
| homospermidine synthase | SAMN05421757_101244 | Not Available | Positive | 274453 - 275871 | 51988.9 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05421757_101245 | Not Available | Negative | 275930 - 276820 | 32570.6 |
| hypothetical protein | SAMN05421757_101246 | Not Available | Negative | 276975 - 278192 | 43157.6 |
| histidinol phosphate aminotransferase apoenzyme | SAMN05421757_101247 | Not Available | Positive | 278524 - 279609 | 38912.6 |
| prephenate dehydrogenase | SAMN05421757_101248 | Not Available | Positive | 279606 - 280538 | 33627.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
