Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voltage-dependent anion channel | SAMN05421757_101228 | Not Available | Negative | 255597 - 256808 | 43470.0 |
| condensin subunit smc | SAMN05421757_101229 | Not Available | Positive | 257120 - 260575 | 125232.0 |
| lytic murein transglycosylase | SAMN05421757_101230 | Not Available | Negative | 260709 - 261884 | 42022.7 |
| dna replication and repair protein recr | SAMN05421757_101231 | Not Available | Negative | 261972 - 262571 | 21215.9 |
| hypothetical protein | SAMN05421757_101232 | Not Available | Negative | 262573 - 262920 | 12194.9 |
| dna polymerase-3 subunit gamma/tau | SAMN05421757_101233 | Not Available | Negative | 263020 - 264786 | 62741.0 |
| ankyrin repeat-containing protein | SAMN05421757_101234 | Not Available | Positive | 265006 - 266520 | 54158.7 |
| ribosome biogenesis gtpase | SAMN05421757_101235 | Not Available | Negative | 266592 - 267662 | 38668.9 |
| sugar phosphate isomerase/epimerase | SAMN05421757_101237 | Not Available | Negative | 268107 - 268862 | 27335.2 |
| hypothetical protein | SAMN05421757_101238 | Not Available | Positive | 269259 - 269924 | 23375.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
