Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_104450 | Not Available | Negative | 2809375 - 2809551 | 6123.22 |
| hypothetical protein | SAMN05421757_104451 | Not Available | Positive | 2809698 - 2810624 | 32419.7 |
| s-formylglutathione hydrolase | SAMN05421757_104452 | Not Available | Positive | 2810693 - 2811526 | 30048.3 |
| hypothetical protein | SAMN05421757_104453 | Not Available | Positive | 2811523 - 2811981 | 16274.5 |
| 2-haloacid dehalogenase | SAMN05421757_104454 | Not Available | Positive | 2812011 - 2812631 | 23260.3 |
| predicted arabinose efflux permease, mfs family | SAMN05421757_104455 | Not Available | Negative | 2812754 - 2813998 | 43716.3 |
| cell division protein zape | SAMN05421757_104456 | Not Available | Positive | 2814133 - 2815251 | 41446.9 |
| protein of unknown function | SAMN05421757_104457 | Not Available | Negative | 2815229 - 2816452 | 45579.3 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN05421757_104458 | Not Available | Negative | 2816553 - 2817845 | 45010.1 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN05421757_104459 | Not Available | Negative | 2817842 - 2818825 | 36097.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
