Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase ii aspartic peptidase. merops family a08 | SAMN05421757_104430 | Not Available | Negative | 2786730 - 2787212 | 17797.2 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN05421757_104431 | Not Available | Negative | 2787216 - 2788805 | 56239.0 |
| uncharacterized conserved protein, heparinase superfamily | SAMN05421757_104432 | Not Available | Negative | 2788817 - 2790586 | 64277.4 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05421757_104433 | Not Available | Negative | 2790653 - 2791936 | 44992.0 |
| hypothetical protein | SAMN05421757_104434 | Not Available | Positive | 2792010 - 2792207 | 7141.51 |
| hypothetical protein | SAMN05421757_104435 | Not Available | Positive | 2792293 - 2792607 | 11542.1 |
| dihydrodipicolinate reductase | SAMN05421757_104436 | Not Available | Negative | 2792615 - 2793424 | 28032.7 |
| ribosome-binding factor a | SAMN05421757_104437 | Not Available | Positive | 2793522 - 2793941 | 15608.7 |
| uncharacterized protein yige, duf2233 family | SAMN05421757_104438 | Not Available | Positive | 2793931 - 2794698 | 27610.9 |
| acetyltransferase (gnat) family protein | SAMN05421757_104439 | Not Available | Negative | 2794708 - 2795325 | 22990.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
