Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor 2 (ef-2/ef-g) | SAMN05421757_104400 | Not Available | Negative | 2758383 - 2760506 | 78288.5 |
| ssu ribosomal protein s7p | SAMN05421757_104401 | Not Available | Negative | 2760534 - 2761004 | 17814.4 |
| ssu ribosomal protein s12p | SAMN05421757_104402 | Not Available | Negative | 2761017 - 2761388 | 14109.4 |
| s-adenosylmethionine uptake transporter | SAMN05421757_104403 | Not Available | Negative | 2761615 - 2762553 | 33053.0 |
| hypothetical protein | SAMN05421757_104404 | Not Available | Positive | 2762783 - 2762947 | 5718.87 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05421757_104405 | Not Available | Positive | 2762960 - 2763904 | 34637.5 |
| protein of unknown function | SAMN05421757_104406 | Not Available | Positive | 2763997 - 2764587 | 21019.5 |
| putative abc transport system atp-binding protein | SAMN05421757_104407 | Not Available | Positive | 2764594 - 2765313 | 25763.9 |
| putative abc transport system permease protein | SAMN05421757_104408 | Not Available | Positive | 2765310 - 2766560 | 44332.1 |
| hypothetical protein | SAMN05421757_104409 | Not Available | Positive | 2766575 - 2767648 | 39380.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
