Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l22p | SAMN05421757_104390 | Not Available | Negative | 2752047 - 2752427 | 14307.6 |
| ssu ribosomal protein s19p | SAMN05421757_104391 | Not Available | Negative | 2752434 - 2752712 | 10493.7 |
| lsu ribosomal protein l2p | SAMN05421757_104392 | Not Available | Negative | 2752716 - 2753558 | 30438.9 |
| sulfotransferase family protein | SAMN05421757_104393 | Not Available | Negative | 2753875 - 2754498 | 23393.1 |
| hypothetical protein | SAMN05421757_104394 | Not Available | Negative | 2754550 - 2754840 | 10375.6 |
| lsu ribosomal protein l23p | SAMN05421757_104395 | Not Available | Negative | 2755038 - 2755334 | 10715.1 |
| lsu ribosomal protein l4p | SAMN05421757_104396 | Not Available | Negative | 2755331 - 2755951 | 22392.3 |
| lsu ribosomal protein l3p | SAMN05421757_104397 | Not Available | Negative | 2755948 - 2756685 | 25626.9 |
| ssu ribosomal protein s10p | SAMN05421757_104398 | Not Available | Negative | 2756701 - 2757012 | 11756.3 |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN05421757_104399 | Not Available | Negative | 2757146 - 2758321 | 42783.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
