Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l24p | SAMN05421757_104380 | Not Available | Negative | 2746056 - 2746361 | 10654.0 |
| lsu ribosomal protein l14p | SAMN05421757_104381 | Not Available | Negative | 2746363 - 2746731 | 13469.6 |
| ssu ribosomal protein s17p | SAMN05421757_104382 | Not Available | Negative | 2746808 - 2747041 | 8958.86 |
| lsu ribosomal protein l29p | SAMN05421757_104383 | Not Available | Negative | 2747046 - 2747252 | 7744.31 |
| hypothetical protein | SAMN05421757_104384 | Not Available | Negative | 2747514 - 2747741 | 8429.91 |
| alanine or glycine:cation symporter, agcs family | SAMN05421757_104385 | Not Available | Positive | 2748043 - 2749479 | 50856.9 |
| conserved hypothetical protein | SAMN05421757_104386 | Not Available | Negative | 2749572 - 2750192 | 23075.3 |
| hypothetical protein | SAMN05421757_104387 | Not Available | Positive | 2750361 - 2750804 | 17112.0 |
| lsu ribosomal protein l16p | SAMN05421757_104388 | Not Available | Negative | 2750884 - 2751297 | 15643.4 |
| ssu ribosomal protein s3p | SAMN05421757_104389 | Not Available | Negative | 2751310 - 2752047 | 27704.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
