Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple antibiotic resistance protein | SAMN05421757_104370 | Not Available | Negative | 2739639 - 2740325 | 24391.8 |
| hypothetical protein | SAMN05421757_104371 | Not Available | Negative | 2740408 - 2740989 | 20656.1 |
| glycerophosphoryl diester phosphodiesterase | SAMN05421757_104372 | Not Available | Negative | 2740976 - 2742823 | 66253.4 |
| lsu ribosomal protein l30p | SAMN05421757_104373 | Not Available | Negative | 2742966 - 2743154 | 6925.76 |
| ssu ribosomal protein s5p | SAMN05421757_104374 | Not Available | Negative | 2743167 - 2743736 | 20664.2 |
| lsu ribosomal protein l18p | SAMN05421757_104375 | Not Available | Negative | 2743854 - 2744213 | 12961.8 |
| lsu ribosomal protein l6p | SAMN05421757_104376 | Not Available | Negative | 2744225 - 2744758 | 19144.2 |
| ssu ribosomal protein s8p | SAMN05421757_104377 | Not Available | Negative | 2744773 - 2745162 | 14264.2 |
| ssu ribosomal protein s14p | SAMN05421757_104378 | Not Available | Negative | 2745175 - 2745480 | 11787.6 |
| lsu ribosomal protein l5p | SAMN05421757_104379 | Not Available | Negative | 2745493 - 2746056 | 20825.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
