Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine transport system permease protein | SAMN05421757_104320 | Not Available | Positive | 2690499 - 2691374 | 31070.0 |
| predicted n-acetyltransferase yhbs | SAMN05421757_104321 | Not Available | Positive | 2691371 - 2691883 | 18720.2 |
| hypothetical protein | SAMN05421757_104322 | Not Available | Positive | 2692267 - 2692416 | 5605.82 |
| na+/proline symporter | SAMN05421757_104323 | Not Available | Positive | 2692440 - 2694236 | 65043.5 |
| hypothetical protein | SAMN05421757_104324 | Not Available | Negative | 2694404 - 2694655 | 9218.07 |
| gtpase, g3e family | SAMN05421757_104325 | Not Available | Positive | 2695179 - 2696486 | 47904.4 |
| hypothetical protein | SAMN05421757_104326 | Not Available | Positive | 2696665 - 2696886 | 8535.12 |
| dna-binding transcriptional regulator, lysr family | SAMN05421757_104327 | Not Available | Negative | 2697025 - 2697939 | 33950.7 |
| glyoxalase family protein | SAMN05421757_104328 | Not Available | Positive | 2698055 - 2698987 | 33661.4 |
| phospholipase/carboxylesterase | SAMN05421757_104329 | Not Available | Positive | 2699015 - 2699635 | 22149.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
