Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_104310 | Not Available | Negative | 2677385 - 2678710 | 46791.9 |
| s-adenosylmethionine-diacylglycerol 3-amino-3-carboxypropyl transferase | SAMN05421757_104311 | Not Available | Negative | 2678710 - 2679801 | 41501.0 |
| pyruvate, water dikinase | SAMN05421757_104312 | Not Available | Negative | 2679788 - 2682244 | 87564.4 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN05421757_104313 | Not Available | Negative | 2682248 - 2683162 | 32830.9 |
| 3-hydroxy-3-methylglutaryl-coenzyme a reductase | SAMN05421757_104314 | Not Available | Negative | 2683159 - 2684430 | 44507.5 |
| hypothetical protein | SAMN05421757_104315 | Not Available | Negative | 2684661 - 2685401 | 25513.9 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05421757_104316 | Not Available | Negative | 2685442 - 2686944 | 55057.3 |
| taurine-pyruvate aminotransferase | SAMN05421757_104317 | Not Available | Positive | 2687204 - 2688580 | 50211.8 |
| taurine transport system substrate-binding protein | SAMN05421757_104318 | Not Available | Positive | 2688659 - 2689657 | 34520.9 |
| taurine transport system atp-binding protein | SAMN05421757_104319 | Not Available | Positive | 2689717 - 2690502 | 28734.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
