Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytoq family protein | SAMN05421757_104240 | Not Available | Negative | 2605240 - 2605689 | 16002.9 |
| sulfoxide reductase heme-binding subunit yedz | SAMN05421757_104241 | Not Available | Negative | 2605717 - 2606316 | 22796.3 |
| phenylalanyl-trna synthetase beta subunit | SAMN05421757_104242 | Not Available | Negative | 2606393 - 2608801 | 85899.6 |
| hypothetical protein | SAMN05421757_104243 | Not Available | Positive | 2609090 - 2609350 | 9006.0 |
| uncharacterized protein yhff | SAMN05421757_104244 | Not Available | Negative | 2609354 - 2609782 | 15539.2 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN05421757_104245 | Not Available | Negative | 2609884 - 2610954 | 39627.4 |
| sulfate permease, sulp family | SAMN05421757_104246 | Not Available | Positive | 2611126 - 2612388 | 43493.7 |
| hint domain-containing protein | SAMN05421757_104247 | Not Available | Negative | 2612392 - 2613465 | 38047.7 |
| lsu ribosomal protein l20p | SAMN05421757_104248 | Not Available | Negative | 2613666 - 2614028 | 13336.1 |
| lsu ribosomal protein l35p | SAMN05421757_104249 | Not Available | Negative | 2614042 - 2614242 | 7469.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
