Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfotransferase family protein | SAMN05421757_104170 | Not Available | Negative | 2544336 - 2544983 | 24494.0 |
| sulfotransferase family protein | SAMN05421757_104171 | Not Available | Negative | 2545030 - 2545677 | 24935.9 |
| hypothetical protein | SAMN05421757_104172 | Not Available | Negative | 2545763 - 2546314 | 20010.5 |
| pyridoxine 5'-phosphate synthase | SAMN05421757_104173 | Not Available | Positive | 2546449 - 2547222 | 28084.4 |
| trna(arg) a34 adenosine deaminase tada | SAMN05421757_104174 | Not Available | Positive | 2547219 - 2547686 | 16645.8 |
| holo-[acyl-carrier protein] synthase | SAMN05421757_104175 | Not Available | Positive | 2547687 - 2548097 | 15047.0 |
| hypothetical protein | SAMN05421757_104176 | Not Available | Negative | 2548102 - 2548950 | 29966.8 |
| signal peptidase i serine peptidase. merops family s26a | SAMN05421757_104177 | Not Available | Positive | 2549137 - 2549913 | 28832.6 |
| ribonuclease-3 | SAMN05421757_104178 | Not Available | Positive | 2549910 - 2550590 | 24806.7 |
| bacterioferritin | SAMN05421757_104179 | Not Available | Positive | 2550703 - 2551194 | 18681.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
