Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclease homologue | SAMN05421757_104150 | Not Available | Positive | 2525244 - 2526242 | 36657.6 |
| Trna-arg | Not Available | Not Available | Positive | 2526362 - 2526438 | Not Available |
| signal transduction histidine kinase | SAMN05421757_104152 | Not Available | Negative | 2526495 - 2527901 | 50631.6 |
| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (e3) component | SAMN05421757_104153 | Not Available | Negative | 2527916 - 2529331 | 49990.2 |
| uncharacterized membrane protein ydjx, tvp38/tmem64 family, snare-associated domain | SAMN05421757_104154 | Not Available | Negative | 2529335 - 2530069 | 25479.8 |
| lsu ribosomal protein l34p | SAMN05421757_104155 | Not Available | Positive | 2530377 - 2530511 | 5139.44 |
| ribonuclease p protein component | SAMN05421757_104156 | Not Available | Positive | 2530529 - 2530885 | 12936.7 |
| hypothetical protein | SAMN05421757_104157 | Not Available | Positive | 2530882 - 2531136 | 9399.31 |
| hydroxymethylbilane synthase | SAMN05421757_104158 | Not Available | Negative | 2531191 - 2532153 | 34235.0 |
| uroporphyrinogen decarboxylase | SAMN05421757_104159 | Not Available | Positive | 2532258 - 2533292 | 37319.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
