Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN05421757_104110 | Not Available | Positive | 2479898 - 2480839 | 34592.9 |
| uncharacterized conserved protein, duf849 family | SAMN05421757_104111 | Not Available | Negative | 2481013 - 2481816 | 28981.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05421757_104112 | Not Available | Positive | 2482007 - 2482930 | 34222.4 |
| 3-oxoadipate enol-lactonase | SAMN05421757_104113 | Not Available | Positive | 2483162 - 2483941 | 27480.0 |
| predicted dehydrogenase | SAMN05421757_104114 | Not Available | Negative | 2484044 - 2485063 | 36930.8 |
| uncharacterized osmc-related protein | SAMN05421757_104115 | Not Available | Positive | 2485442 - 2485912 | 16882.3 |
| hypothetical protein | SAMN05421757_104116 | Not Available | Positive | 2485973 - 2486941 | 33880.7 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421757_104117 | Not Available | Positive | 2487100 - 2488053 | 34278.6 |
| putative tricarboxylic transport membrane protein | SAMN05421757_104118 | Not Available | Positive | 2488050 - 2488652 | 21425.1 |
| putative tricarboxylic transport membrane protein | SAMN05421757_104119 | Not Available | Positive | 2488685 - 2490169 | 52439.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
