Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_10460 | Not Available | Positive | 2427508 - 2427987 | 17741.3 |
| atp phosphoribosyltransferase catalytic subunit | SAMN05421757_10461 | Not Available | Negative | 2427995 - 2428693 | 25536.4 |
| atp phosphoribosyltransferase regulatory subunit | SAMN05421757_10462 | Not Available | Negative | 2428690 - 2429805 | 40615.7 |
| histidyl-trna synthetase | SAMN05421757_10463 | Not Available | Negative | 2429809 - 2431287 | 53516.5 |
| slyx protein | SAMN05421757_10464 | Not Available | Positive | 2431388 - 2431588 | 7501.85 |
| protein of unknown function | SAMN05421757_10465 | Not Available | Negative | 2431608 - 2432024 | 15447.7 |
| hypothetical protein | SAMN05421757_10466 | Not Available | Positive | 2432205 - 2432882 | 24389.1 |
| lysyl-trna synthetase, class i | SAMN05421757_10467 | Not Available | Negative | 2432928 - 2434511 | 59869.8 |
| tellurite resistance protein terb | SAMN05421757_10468 | Not Available | Positive | 2434653 - 2435075 | 15735.7 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05421757_10469 | Not Available | Negative | 2435086 - 2436594 | 53807.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
