Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monosaccharide abc transporter membrane protein, cut2 family | SAMN05421757_10430 | Not Available | Negative | 2393607 - 2394602 | 34912.7 |
| rhamnose abc transporter membrane protein | SAMN05421757_10431 | Not Available | Negative | 2394599 - 2395582 | 34257.2 |
| rhamnose abc transporter atp-binding protein | SAMN05421757_10432 | Not Available | Negative | 2395579 - 2397123 | 55532.9 |
| rhamnose-binding protein | SAMN05421757_10433 | Not Available | Negative | 2397199 - 2398191 | 34001.5 |
| transcriptional regulator, deor family | SAMN05421757_10434 | Not Available | Negative | 2398241 - 2399047 | 29235.4 |
| rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | SAMN05421757_10435 | Not Available | Positive | 2399234 - 2401336 | 75848.9 |
| predicted aconitase subunit 1 | SAMN05421757_10436 | Not Available | Negative | 2401479 - 2403173 | 59106.8 |
| transcriptional regulator, xre family with cupin sensor | SAMN05421757_10437 | Not Available | Positive | 2403297 - 2403932 | 23305.8 |
| malate/lactate/ureidoglycolate dehydrogenase, ldh2 family | SAMN05421757_10438 | Not Available | Positive | 2403940 - 2404977 | 36489.7 |
| dna-binding transcriptional regulator, gntr family | SAMN05421757_10439 | Not Available | Negative | 2405000 - 2405734 | 27099.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
