Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_103503 | Not Available | Negative | 2361444 - 2361657 | 7799.28 |
| tripartite tricarboxylate transporter tctb family protein | SAMN05421757_1041 | Not Available | Negative | 2361750 - 2362196 | 16132.9 |
| dna-binding transcriptional regulator, iclr family | SAMN05421757_1042 | Not Available | Negative | 2362277 - 2363086 | 30505.5 |
| multiple antibiotic resistance protein | SAMN05421757_1043 | Not Available | Positive | 2363329 - 2363589 | 8771.92 |
| hypothetical protein | SAMN05421757_1044 | Not Available | Positive | 2363619 - 2363993 | 13801.2 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421757_1045 | Not Available | Positive | 2364256 - 2365074 | 30445.1 |
| hypothetical protein | SAMN05421757_1046 | Not Available | Positive | 2365325 - 2365789 | 15440.1 |
| tryptophanyl-trna synthetase | SAMN05421757_1047 | Not Available | Positive | 2366233 - 2367234 | 36798.1 |
| transcriptional regulator, rpir family | SAMN05421757_1048 | Not Available | Negative | 2367726 - 2368595 | 31798.4 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05421757_1049 | Not Available | Negative | 2368651 - 2369673 | 37631.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
