Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_103433 | Not Available | Positive | 2285605 - 2286108 | 16816.7 |
| selenophosphate synthase | SAMN05421757_103434 | Not Available | Negative | 2286185 - 2287249 | 36645.3 |
| superfamily ii dna and rna helicase | SAMN05421757_103435 | Not Available | Negative | 2287553 - 2289004 | 52851.9 |
| uncharacterized conserved protein | SAMN05421757_103436 | Not Available | Negative | 2289220 - 2289837 | 21795.6 |
| hypothetical protein | SAMN05421757_103437 | Not Available | Negative | 2289919 - 2290539 | 22944.8 |
| uncharacterized conserved protein | SAMN05421757_103438 | Not Available | Negative | 2290579 - 2291007 | 15510.5 |
| bacterial peptide chain release factor 3 (brf-3) | SAMN05421757_103439 | Not Available | Negative | 2291061 - 2292668 | 59688.8 |
| quaternary ammonium compound-resistance protein suge | SAMN05421757_103440 | Not Available | Positive | 2292862 - 2293182 | 10993.0 |
| eama domain-containing membrane protein rard | SAMN05421757_103441 | Not Available | Positive | 2293287 - 2294171 | 31212.4 |
| uncharacterized conserved protein | SAMN05421757_103442 | Not Available | Positive | 2294340 - 2295827 | 52469.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
