Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like enzyme, putative cysteine protease | SAMN05421757_103333 | Not Available | Positive | 2177237 - 2178148 | 33352.5 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05421757_103334 | Not Available | Positive | 2178302 - 2179468 | 41787.2 |
| two-component system, cell cycle sensor histidine kinase and response regulator ccka | SAMN05421757_103335 | Not Available | Positive | 2179583 - 2181904 | 83653.5 |
| hypothetical protein | SAMN05421757_103336 | Not Available | Negative | 2181921 - 2182547 | 23566.4 |
| recombination protein reca | SAMN05421757_103337 | Not Available | Positive | 2182752 - 2183825 | 38326.9 |
| alanyl-trna synthetase | SAMN05421757_103338 | Not Available | Positive | 2184109 - 2186769 | 95696.9 |
| uncharacterized conserved protein, duf1330 family | SAMN05421757_103339 | Not Available | Positive | 2186774 - 2187061 | 10522.3 |
| hypothetical protein | SAMN05421757_103340 | Not Available | Negative | 2187096 - 2188058 | 35745.0 |
| gtp-binding protein | SAMN05421757_103341 | Not Available | Negative | 2188345 - 2190162 | 66629.8 |
| tyrosyl-trna synthetase | SAMN05421757_103342 | Not Available | Negative | 2190320 - 2191573 | 46042.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
