Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| competence protein comec | SAMN05421757_103273 | Not Available | Positive | 2104364 - 2106454 | 72966.9 |
| sos-response transcriptional repressor, lexa | SAMN05421757_103274 | Not Available | Negative | 2106600 - 2107301 | 25638.1 |
| molybdopterin molybdochelatase | SAMN05421757_103275 | Not Available | Negative | 2107411 - 2108583 | 40473.3 |
| cyclic pyranopterin monophosphate synthase subunit moac | SAMN05421757_103276 | Not Available | Negative | 2108580 - 2109056 | 16511.3 |
| indole-3-glycerol phosphate synthase | SAMN05421757_103277 | Not Available | Negative | 2109056 - 2109880 | 29555.3 |
| uracil-dna glycosylase | SAMN05421757_103278 | Not Available | Negative | 2109877 - 2110542 | 24248.8 |
| anthranilate phosphoribosyltransferase | SAMN05421757_103279 | Not Available | Negative | 2110539 - 2111558 | 34412.4 |
| anthranilate synthase, component ii | SAMN05421757_103280 | Not Available | Negative | 2111555 - 2112136 | 21139.7 |
| uncharacterized conserved protein yibq, putative polysaccharide deacetylase 2 family | SAMN05421757_103281 | Not Available | Positive | 2112281 - 2114437 | 72296.4 |
| cardiolipin synthase | SAMN05421757_103282 | Not Available | Positive | 2114816 - 2116228 | 52261.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
