Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421757_103263 | Not Available | Positive | 2095101 - 2095292 | 7519.19 |
| hypothetical protein | SAMN05421757_103264 | Not Available | Positive | 2095323 - 2095748 | 15264.5 |
| hypothetical protein | SAMN05421757_103265 | Not Available | Positive | 2095757 - 2095918 | 6337.98 |
| cytochrome c-type biogenesis protein ccmf | SAMN05421757_103266 | Not Available | Positive | 2096111 - 2098090 | 71472.1 |
| cytochrome c-type biogenesis protein ccmh | SAMN05421757_103267 | Not Available | Positive | 2098087 - 2098542 | 16309.7 |
| enoyl-coa hydratase | SAMN05421757_103268 | Not Available | Positive | 2098591 - 2099403 | 29023.6 |
| transglycosylase slt domain-containing protein | SAMN05421757_103269 | Not Available | Positive | 2099612 - 2100583 | 35517.6 |
| hypothetical protein | SAMN05421757_103270 | Not Available | Positive | 2100769 - 2101233 | 16698.7 |
| citrate synthase | SAMN05421757_103271 | Not Available | Negative | 2101316 - 2102608 | 48458.7 |
| glutamyl-trna synthetase | SAMN05421757_103272 | Not Available | Negative | 2102690 - 2104108 | 51781.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
