Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05421757_103253 | Not Available | Negative | 2086674 - 2087585 | 34325.3 |
| putative hemolysin | SAMN05421757_103254 | Not Available | Positive | 2087838 - 2088743 | 33556.6 |
| glutamate racemase | SAMN05421757_103255 | Not Available | Positive | 2088743 - 2089555 | 29611.5 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN05421757_103256 | Not Available | Positive | 2089611 - 2090639 | 36998.5 |
| cytochrome c-type biogenesis protein ccme | SAMN05421757_103257 | Not Available | Positive | 2090674 - 2091135 | 16386.7 |
| hypothetical protein | SAMN05421757_103258 | Not Available | Positive | 2091332 - 2091718 | 13178.6 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421757_103259 | Not Available | Negative | 2091753 - 2093045 | 46624.0 |
| cytochrome c553 | SAMN05421757_103260 | Not Available | Negative | 2093213 - 2093587 | 13169.5 |
| predicted peptidoglycan domain-containing protein | SAMN05421757_103261 | Not Available | Positive | 2093925 - 2094536 | 22172.4 |
| holin of 3tms, for gene-transfer release | SAMN05421757_103262 | Not Available | Positive | 2094536 - 2095114 | 20160.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
