Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol 2-dehydrogenase | SAMN05421757_101148 | Not Available | Negative | 159598 - 161076 | 53501.7 |
| d-sorbitol dehydrogenase (acceptor) | SAMN05421757_101149 | Not Available | Negative | 161267 - 162040 | 27179.5 |
| sorbitol abc transporter atp-binding protein /mannitol abc transporter atp-binding protein | SAMN05421757_101150 | Not Available | Negative | 162037 - 163041 | 36552.1 |
| sorbitol abc transporter membrane protein /mannitol abc transporter membrane protein | SAMN05421757_101151 | Not Available | Negative | 163054 - 163884 | 30582.4 |
| sorbitol abc transporter membrane protein /mannitol abc transporter membrane protein | SAMN05421757_101152 | Not Available | Negative | 163895 - 164773 | 32023.2 |
| sorbitol-binding protein /mannitol-binding protein | SAMN05421757_101153 | Not Available | Negative | 164898 - 166205 | 47422.6 |
| dna-binding transcriptional regulator lsrr, deor family | SAMN05421757_101154 | Not Available | Negative | 166311 - 167273 | 34380.4 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421757_101155 | Not Available | Negative | 167270 - 167956 | 25079.2 |
| sodium/proton antiporter, cpa1 family | SAMN05421757_101156 | Not Available | Negative | 168063 - 170576 | 91310.9 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05421757_101157 | Not Available | Negative | 170698 - 171903 | 42788.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
