Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN05421757_103153 | Not Available | Negative | 1983032 - 1984123 | 38444.5 |
| lsu ribosomal protein l32p | SAMN05421757_103154 | Not Available | Negative | 1984159 - 1984365 | 7597.8 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN05421757_103155 | Not Available | Negative | 1984683 - 1985222 | 19507.2 |
| beta-barrel assembly machine subunit bame | SAMN05421757_103156 | Not Available | Positive | 1985308 - 1985775 | 16641.6 |
| peptide-methionine (r)-s-oxide reductase | SAMN05421757_103157 | Not Available | Negative | 1985822 - 1986235 | 15171.4 |
| ornithine-acyl[acyl carrier protein] n-acyltransferase | SAMN05421757_103158 | Not Available | Positive | 1986426 - 1987157 | 27262.1 |
| glycosyl transferase family 2 | SAMN05421757_103159 | Not Available | Positive | 1987224 - 1988102 | 29861.7 |
| atp-binding cassette, subfamily f, uup | SAMN05421757_103160 | Not Available | Positive | 1988167 - 1990002 | 66676.6 |
| hypothetical protein | SAMN05421757_103161 | Not Available | Positive | 1990132 - 1990488 | 13320.8 |
| opacity protein | SAMN05421757_103162 | Not Available | Positive | 1990738 - 1991319 | 20125.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
