Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Tropicimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Tropicimonas |
| Species | Tropicimonas sediminicola |
| Strain | strain DSM 29339 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
869409 bp
Thymine Count
870408 bp
Guanine Count
1713070 bp
Cytosine Count
1721333 bp
Genome Length
5174220 bp
Protein-coding Genes
4782 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, luxr family | SAMN05421757_103133 | Not Available | Negative | 1964270 - 1964734 | 16498.0 |
| hypothetical protein | SAMN05421757_103134 | Not Available | Positive | 1964949 - 1965749 | 29828.6 |
| phytochelatin synthase | SAMN05421757_103135 | Not Available | Positive | 1965888 - 1966646 | 26677.4 |
| cyclic pyranopterin monophosphate synthase subunit moaa | SAMN05421757_103136 | Not Available | Negative | 1966741 - 1967742 | 37789.5 |
| hypothetical protein | SAMN05421757_103137 | Not Available | Positive | 1967854 - 1968336 | 16231.4 |
| iron-sulfur cluster assembly accessory protein | SAMN05421757_103138 | Not Available | Negative | 1968350 - 1968673 | 11293.4 |
| dgtpase | SAMN05421757_103139 | Not Available | Positive | 1968752 - 1969891 | 42350.3 |
| sodium/proton antiporter, cpa1 family | SAMN05421757_103140 | Not Available | Positive | 1970054 - 1971874 | 63637.8 |
| arginyl-trna synthetase | SAMN05421757_103141 | Not Available | Positive | 1971928 - 1973673 | 63173.2 |
| sporulation related domain-containing protein | SAMN05421757_103142 | Not Available | Positive | 1973771 - 1974874 | 38066.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
